A data analysis pipeline for shotgun mass-spectrometry proteomics.
Open source and targeted at the needs of academic core facilities.
Please Login to CPFP to analyze data or view results.
Guest login: Username
Development of CPFP at the University of Oxford and UT Southwestern Medical Center has been funded by: John Fell OUP Research Fund, Edward Penley Abraham Fund, European Research Council FP7 (233240), Cancer Research & Prevention Institute of Texas (RP120613 / R1121).
CPFP incorporates open-source software including the Trans-Proteomic Pipeline (TPP), OMSSA, X!Tandem.
CPFP version 2.1.1 @ cpfp (proteomics.swmed.edu)
Page requested 18:27:03 21-Aug-2017 by ec2-54-145-95-149.compute-1.amazonaws.com
CPFP is built on the ISB Trans-Proteomic Pipeline, GPM X!Tandem, and NCBI OMSSA.